yeah I struggled with this as well when I first went to go ahead and install a autonomous AP. Heres my configuration. VLAN 3 is my managment VLAN 4 is my wireless vlan this is for a 1200. You have to use different bridge groups for your dot1radio managment vlan and one for your wireless vlan. Due to you tagging one vlan and not tagging the other vlan as native youll end up with multiple brdige-groups. If you try to put vlan 64 and 65 with the same BVI youll prolly lose connection

.
the switchport to the AP.
interface FastEthernet0/4
switchport trunk encapsulation dot1q
switchport trunk native vlan 3
switchport trunk allowed vlan 3,4
switchport mode trunk
spanning-tree portfast trunk
end
!
AP configuration
interface Dot11Radio0.3
encapsulation dot1Q 3 native
no ip route-cache
bridge-group 1
bridge-group 1 subscriber-loop-control
bridge-group 1 block-unknown-source
no bridge-group 1 source-learning
no bridge-group 1 unicast-flooding
bridge-group 1 spanning-disabled
!
!
interface Dot11Radio0.4
encapsulation dot1Q 4
no ip route-cache
bridge-group 4
bridge-group 4 block-unknown-source
no bridge-group 4 source-learning
no bridge-group 4 unicast-flooding
bridge-group 4 spanning-disabled
!
interface FastEthernet0.3
encapsulation dot1Q 3 native
no ip route-cache
bridge-group 1
no bridge-group 1 source-learning
bridge-group 1 spanning-disabled
!
interface FastEthernet0.4
encapsulation dot1Q 4
no ip route-cache
bridge-group 4
no bridge-group 4 source-learning
bridge-group 4 spanning-disabled
!
interface BVI1
ip address 192.168.3.3 255.255.255.0
no ip route-cache
So you are going to have 2 different BVI's.